Package index
-
create_module()
- Create a Wallace module
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ecoClimate_getdata()
- ecoClimate_getdata
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ecoClimate_select()
- ecoClimate_select
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envs_ecoClimate()
- envs_ecoClimate Obtain ecoClimate variables
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envs_userEnvs()
- envs_userEnvs
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envs_worldclim()
- envs_worldclim Obtain WorldClim variables
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espace_nicheOv()
- espace_nicheOv Niche Overlap
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espace_occDens()
- Occurrence density grid
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espace_pca()
- espace_pca Principal component analysis
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model_bioclim()
- model_bioclim Generate Bioclim model
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model_maxent()
- model_maxent Generate maxent.jar or maxnet model
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occs_queryDb()
- occs_queryDb Query online database for species occurrence records.
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occs_userOccs()
- occs_userOccs Loads user provided occurrence records
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part_partitionOccs()
- part_partitionOccs Partition occurrence data
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penvs_bgExtent()
- penvs_bgExtent Generate background extent
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penvs_bgMask()
- penvs_bgMask Mask environmental data
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penvs_bgSample()
- penvs_bgSample Sample background points
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penvs_drawBgExtent()
- penvs_drawBgExtent: Draw background extent
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penvs_userBgExtent()
- penvs_userBgExtent: user provided background extent
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poccs_removeByID()
- poccs_removeByID Remove occurrence by ID
-
poccs_selectOccs()
- poccs_selectOccs Remove occurrences outside of polygon
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poccs_thinOccs()
- poocs_thinOccs Thin occurrences
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register_module()
- Register a Wallace module
-
run_wallace()
- Run Wallace Application
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vis_bioclimPlot()
- vis_bioclimPlot Visualize bivariate plot of BIOCLIM model
-
wallace-package
wallace
- Wallace: A modular platform for reproducible ecological modeling
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xfer_area()
- xfer_area Transfer model to a new area
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xfer_draw()
- xfer_draw Draw extent of transfer
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xfer_mess()
- xfer_mess generate MESS map for transferred raster
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xfer_time()
- xfer_time Transfer model to a new time
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xfer_userEnvs()
- xfer_userEnvs Transfer model to user specified area and time
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xfer_userExtent()
- xfer_userExtent: user provided extent of transfer