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All functions

create_module()
Create a Wallace module
ecoClimate_getdata()
ecoClimate_getdata
ecoClimate_select()
ecoClimate_select
envs_ecoClimate()
envs_ecoClimate Obtain ecoClimate variables
envs_userEnvs()
envs_userEnvs
envs_worldclim()
envs_worldclim Obtain WorldClim variables
espace_nicheOv()
espace_nicheOv Niche Overlap
espace_occDens()
Occurrence density grid
espace_pca()
espace_pca Principal component analysis
model_bioclim()
model_bioclim Generate Bioclim model
model_maxent()
model_maxent Generate maxent.jar or maxnet model
occs_queryDb()
occs_queryDb Query online database for species occurrence records.
occs_userOccs()
occs_userOccs Loads user provided occurrence records
part_partitionOccs()
part_partitionOccs Partition occurrence data
penvs_bgExtent()
penvs_bgExtent Generate background extent
penvs_bgMask()
penvs_bgMask Mask environmental data
penvs_bgSample()
penvs_bgSample Sample background points
penvs_drawBgExtent()
penvs_drawBgExtent: Draw background extent
penvs_userBgExtent()
penvs_userBgExtent: user provided background extent
poccs_removeByID()
poccs_removeByID Remove occurrence by ID
poccs_selectOccs()
poccs_selectOccs Remove occurrences outside of polygon
poccs_thinOccs()
poocs_thinOccs Thin occurrences
register_module()
Register a Wallace module
run_wallace()
Run Wallace Application
vis_bioclimPlot()
vis_bioclimPlot Visualize bivariate plot of BIOCLIM model
wallace-package wallace
Wallace: A modular platform for reproducible ecological modeling
xfer_area()
xfer_area Transfer model to a new area
xfer_draw()
xfer_draw Draw extent of transfer
xfer_mess()
xfer_mess generate MESS map for transferred raster
xfer_time()
xfer_time Transfer model to a new time
xfer_userEnvs()
xfer_userEnvs Transfer model to user specified area and time
xfer_userExtent()
xfer_userExtent: user provided extent of transfer